Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912645.1_cds_XP_016462741.1_55937
CDS Infomation

[gene=LOC107785863] [db_xref=GeneID:107785863] [protein=transmembrane protein 87A-like] [protein_id=XP_016462741.1] [location=complement(join(93591..93753,94499..94635,98989..99084,99194..100130,101604..101839))] [gbkey=CDS]
Sequence

ATGGGCACTACTATTTCAGTTCAATGCTTACTCACTGTACTAGTACAACTACTATTACTA
TCAGTCTTCAGATCAGTAGAATCCTCAATTCACACCTACGACAGAGATCCGTTTAGAGAA
GTCGGAAATGCTTACCTTGTCTCCGGCGGAAGTGAAGGCGTCGCCGCCTCCCGCTTCATT
CCTCCGCCGCGTCGCGCATTTCGATCCTCTGCCCACGACGGACTGTCTTATATCAGGTTT
GATAATATCACATTTTGGAGAAGTAAAGCAGCTGCAAACCGGAATCCAACTATGGCATAT
AATAGTGGGTTGGTTCAGATCATAATATTTGAGGCTGCAGACCGTGACAATATTGGTGGT
TCACCATATAGTGGACAAAGGTCCATTTGTTGCACCGCTGATCTTGCTAAACTTGAAGGT
TGCAAACAAGGGGAAGTCATTAGAACACCTTCAGCAACAGATGCTAATTGGCCGATGGTG
TTGAATGTAAACTTTAGAGGAAGGCAGTTATCAGCCCAATTGAAGAAGAAGGAGGTTTAC
ATAAAAAAGACTGGGATGTATAATCTCTTCTTCATCTCATGTGATCCTAAGCTTAAGGGA
ATGAAGGTGTCTGGAAGGACAGTGTGGAAAAATCCTGATGGATATTTGCCTGGTCGAATG
TCACCCCTAATGAAGTTTTATGCTATAATGACCGTAGCATATATACTTCTTGCTGGAATC
TGGTGTCTTCAGTATGTCAGATACCGGCAGGACGTTCTGCCGCTCCAATACTGCATCACT
GGGGTTATTGCCCTTGGGTTGTTGGAGATGATATTTTGGTACTTTGATTATGCTTATTTC
AACAATACTGGTACAAGGCCTGTGGGACTCACGACTTGGGTTGTTATAATTGGAGCTATA
AGGAGAACTGTATCACGCCTTCTTATTCTTTCTATCTCAATGGGTTATGGTGTTGTTCGT
CCTACCCTTGGTGGTCTCACCACTAAGGTGCTCCTTCTTGGAATAACTTATTTTGTGGCA
TCTATACTGCTAAACATTACCGAATATGTTGGTACAATAAATGACATTGCAGGGCGGGCA
AGAGTCCTGTTGGTCCTTCCTGATGCATTATTAGATGCATTTTTGATCTTATGGATTTTC
ACTTCTCTTTCTAAGACACTGGAGCAGCTGCAGGCAAAGAGGAGTTCTGTGAAGTTGGAT
ATTTACAGACAATTTTCAAATGCATTAGCAATCACTGTCATTGCTTCAGTTGCATGGATA
GGATACGAGGTTTACTTCAAAGCAACAGATCCCTTCAATGAGAGGTGGCAGGGAGGTTGG
ATCATCACTGCTTTCTGGGATATTCTTGCATTTGGACTGCTGTGTGTCATCTGCTACCTA
TGGGCACCATCTCAGAGCTCTCAACGTTATGCATACTCTGATGTGAGGGGTGAAGAGGAC
GACGAAGAAACTGAATCCTTATGCAAAGAAACTCCTAAAGGTGACATCAGTCTTATCAAA
ATGGATAGGAAGGAAGGTAGCGACAGTTCAGATGTAGAAGATGATATTCAAGAGGGTAAA
AGGGAATGA

Peptide Sequence

PEP ID

XP_016462741.1
PEP Infomation

PREDICTED: transmembrane protein 87A-like [Nicotiana tabacum]
Sequence

MGTTISVQCLLTVLVQLLLLSVFRSVESSIHTYDRDPFREVGNAYLVSGGSEGVAASRFI
PPPRRAFRSSAHDGLSYIRFDNITFWRSKAAANRNPTMAYNSGLVQIIIFEAADRDNIGG
SPYSGQRSICCTADLAKLEGCKQGEVIRTPSATDANWPMVLNVNFRGRQLSAQLKKKEVY
IKKTGMYNLFFISCDPKLKGMKVSGRTVWKNPDGYLPGRMSPLMKFYAIMTVAYILLAGI
WCLQYVRYRQDVLPLQYCITGVIALGLLEMIFWYFDYAYFNNTGTRPVGLTTWVVIIGAI
RRTVSRLLILSISMGYGVVRPTLGGLTTKVLLLGITYFVASILLNITEYVGTINDIAGRA
RVLLVLPDALLDAFLILWIFTSLSKTLEQLQAKRSSVKLDIYRQFSNALAITVIASVAWI
GYEVYFKATDPFNERWQGGWIITAFWDILAFGLLCVICYLWAPSQSSQRYAYSDVRGEED
DEETESLCKETPKGDISLIKMDRKEGSDSSDVEDDIQEGKRE

Transcript Sequence

Gene sequence data has not been registered.